1. Summary

AutoSeq is a "base caller", a program that interprets the binary electropherogram data generated by an automated fluorescent sequencing machine into a string of characters representing the DNA sequence. This program was originally written by Reece Hart circa 1993, and updated by Joe Burks in 2003-2005. The updated version compiles on GCC 3, and skips a lot of logging calls, so that it runs faster. This code is in the public domain.